José R. B. Gomes

Investigador Principal

Perfil biográfico

Researcher ID
ORCID

 

1991-1995
- Licenciatura em Química, Faculdade de Ciências da Universidade do Porto.

1995-2000
- Doutoramento em Química pela Faculdade de Ciências da Universidade do Porto (área da Química Computacional), onde se dedicou ao estudo de processos químicos sobre superfícies de metais de transição, sob a supervisão do Prof. Doutor José A. N. Ferreira Gomes. Grau obtido no dia 5 de Janeiro de 2000.

2000
- Pós-doutoramento no Departament de Química Física da Facultat de Química de Barcelona, Espanha, onde fez trabalho de investigação sobre a adsorção em óxidos metálicos, no âmbito de um programa de pós-doutoramento sob orientação do Prof. Doutor Francesc Illas;

2001-2007
-Investigador pós-doutoral no grupo de Termoquímica da Faculdade de Ciências do Porto, dedicando-se à aplicação de técnicas de Química-Computacional em estudos estruturais e termodinâmicos de compostos aromáticos heterocíclicos e de complexos de coordenação com metais de transição, sob a orientação do Prof. Doutor Manuel A. V. Ribeiro da Silva.


2007-2012
- Investigador auxiliar (programa Ciência 2007) no Laboratório Associado CICECO.

2012-2013
- Investigador auxiliar no Laboratório Associado CICECO.

2013-presente
- Investigador principal no Laboratório Associado CICECO.

 

Coordena o Grupo 6.

Interesses científicos

Uso de computadores e métodos computacionais em química.


Palavras-chave:

- Estrutura molecular
- Termoquímica em fase gasosa
- Perfis de reacções em fase gasosa
- Adsorção química e/ou física
- Reacções em superfícies (metálicas ou óxidos metálicos)
- Catálise heterogénea

Projectos financiados

ATIVOS

Coordenador das Missões Científicas de Curto Prazo (STSMs) da Ação COST Computational materials sciences for efficient water splitting with nanocrystals from abundant elements (CA 18234).

Membro da equipa do projeto Delivery vehicles of therapeutic gasotransmitters NO and H2S based on nanoporous materials (Fundação para a Ciência e a Tecnologia, ref. PTDC/MED-QUI/28721/2017, de 01-10-2018 a 30-09-2021).

Co-investigador principal do projeto DataCor - Smart Data to Design Corrosion Inhibitors (Compete 2020, ref. PTDC/QUI-QFI/30256/2017, de 16-07-2018 a 15-07-2021).

Investigador principal do projeto SILVIA - Modeling the synthesis of silica materials via multiscale computer simulations (Programa Operacional Centro 2020, ref. PTDC/QUI-QFI/31002/2017, de 01-06-2018 a 31-05-2021).
 

CONCLUÍDOS

Investigador principal do projeto Modeling the synthesis of silica materials with a novel reactive coarse-grained model (RES - Red Española de Supercomputación, ref. QS-2019-2-0034).

Membro da equipa do projeto Dissociation mechanism of water on two-dimensional transition metal carbides (MXenes) (RES - Red Española de Supercomputación, ref. QS-2019-2-0019).

Investigador principal do projeto SELMA - Unveiling the self-healing mechanisms associated with smart nanocontainers (Fundação para a Ciência e a Tecnologia, ref. PTDC/QEQ-QFI/4719/2014).

Membro da equipa do projeto Variable pressure solid-state NMR methods to study gas-surface interactions in nanoporous sorbent materials for industrial post/pre-combustion CO2 capture (Fundação para a Ciência e a Tecnologia, ref. PTDC/QEQ-QAN/6373/2014).

Membro da equipa do projeto TUBITAK - Phase transitions and ferroelectricity in self-assembled peptides nanotubes (Fundação para a Ciência e a Tecnologia, ref. TUBITAK/0006/2014).

Membro da equipa do projeto UNIRCELL - Unitised regenerative fuel cell for efficient renewable energy supply: from materials to device (FCT-COMPETE / Programas de Atividades Conjuntas do Portugal 2020, ref. POCI-01-0145-FEDER-016422).

Membro da equipa do projeto SUSPHOTOSOLUTIONS - Soluções Fotovoltaicas Sustentáveis (Programa Operacional Centro 2020, ref. CENTRO-01-0145-FEDER-000005).

Membro da equipa do projeto SGH - Smart Green Homes (Sistema de Incentivos à I&D Empresarial, ref. POCI-01-0247-FEDER-007678).

Participante no projeto CO adsorption in MXenes (European Commission - HPC-EUROPA3, ref. INFRAIA-2016-1-730897).

Membro da equipa do projeto FISHING - Fishing falcipain hit inhibitors from Malaria Boxes: in silico target deconvolution model development and validation (Fundação para a Ciência e a Tecnologia, ref. EXPL/QEQ-COM/0927/2013).

Investigador principal do projeto CODECAT - COmputational DEsign of new CATalysts for the water gas shift reaction (Fundação para a Ciência e a Tecnologia, ref. PTDC/QUI-QUI/117439/2010).

Investigador principal do projeto SILICAT - Theoretical Study of Silicate Chemistry in the Synthesis of Nanoporous Materials (Fundação para a Ciência e a Tecnologia, ref. PTDC/QUI-QUI/109914/2009).

Membro da equipa do projeto Development of high-resolution 1H solid-state NMR methods and applications on materials and molecules of biological interest (Fundação para a Ciência e a Tecnologia, ref. PTDC/QUI-QUI/100998/2008).

Membro da equipa do projeto Synthesis and Characterization of New Microporous Niobium Silicate and Titanosilica Membranes and Their Application to the Separation of Hydrogen-containing Mixtures (Fundação para a Ciência e a Tecnologia, ref. PTDC/EQU-EQU/100476/2008).

Membro da equipa do projeto Intelligent Design of Mesoporous Organosilicas for Adsorptive Separation Processes (Fundação para a Ciência e a Tecnologia, ref. PTDC/EQU-EQU/099423/2008).

 

Publicações seleccionadas

Lista completa: http://sweet.ua.pt/jrgomes/publications.html

Publicações mais recentes:

2021

Exploring periodic mesoporous organosilicas for ethane-ethylene adsorption-separation
M. Bordonhos, M. A. O. Lourenço, José R. B. Gomes, P. Ferreira, Moisés L. Pinto
Micropor. Mesopor. Mat., in press. [link]

CO2 and CH4 adsorption on periodic mesoporous organosilica: A DFT study
M. A. O. Lourenço, P. Ferreira, José R. B. Gomes
Mater. Today Commun., 26 (2021) 102088. [link]

Unravelling moisture-induced CO2 chemisorption mechanisms in amine-modified silica sorbents at the molecular scale
M. Sardo, R. Afonso, J. Juźków, M. Pacheco, M. Bordonhos, M. L. Pinto, José R. B. Gomes, L. Mafra
J. Mater. Chem. A, in press. [link]

The Ti2CO2 MXene as a nucleobase 2D sensor: a first-principles study
J. D. Gouveia, G. Novell-Leruth, F. Viñes, F. Illas, José R. B. Gomes
Appl. Surf. Sci., 544 (2021) 148946. [link]

Multifunctionality in an Ion-Exchanged Porous Metal-Organic Framework
S. M. F. Vilela, J. A. R. Navarro, P. Barbosa, R. F. Mendes, G. Pérez-Sánchez, H. Nowell, D. Ananias, F. Figueiredo, José R. B. Gomes, J. P. C. Tomé, F. A. Almeida Paz
J. Am. Chem. Soc., 143 (2021) 1365. [link]

Diffusion of quercetin in compressed liquid ethyl acetate and ethanol
B. Zêzere, J. Iglésias, I. Portugal, José R. B. Gomes, C. M. Silva
J. Mol. Liquids, 324 (2021) 114714. [link]

Self-Consistent Electrostatic Embedding for Liquid Phase Polarization
M. Jorge, José R. B. Gomes, Andrew W. Milne
J. Mol. Liquids, 322 (2021) 114550. [link]

Revisiting Tracer Liu-Silva-Macedo model for binary diffusion coefficient using the largest database of liquid and supercritical systems
B. Zêzere, I. Portugal, José R. B. Gomes, Carlos M. Silva
J. Supercrit. Fluid., 168 (2021) 105073. [link]

 

2020

Unveiling the local structure of 2-mercaptobenzothiazole intercalated in (Zn2Al) layered double hydroxides
G. Novell-Leruth, G. Pérez-Sánchez, T. L. P. Galvão, D. Boiba, P. Syargei, J. Carneiro, J. Tedim, José R. B. Gomes
Appl. Clay Sci., 198 (2020) 105842. [link]

First-principles calculations of the adsorption behavior of amino acids on a titanium carbide MXene
J. D. Gouveia, G. Novell-Leruth, P. Reis, F. Viñes, F.Illas, José R. B. Gomes
ACS Appl. Bio Mater., 3 (2020) 5913. [link]

Mesoscale model of the synthesis of periodic mesoporous benzene-silica
J. D. Gouveia, G. Pérez-Sánchez, S. M. Santos, A. P. Carvalho, José R. B. Gomes, M. Jorge
J. Mol. Liquids, 316 (2020) 113861. [link]

Surface Enhanced Raman Scattering Due to a Synergistic Effect in ZnS and Graphene Oxide
J. Lopes, S. Fateixa, A. Estrada, J. D. Gouveia, José R. B. Gomes, T. Trindade
J. Phys. Chem. C, 124 (2020) 12742. [link]

MXenes atomic layer stacking phase transitions and their chemical activity consequences
J. D. Gouveia, F. Viñes, F.Illas, José R. B. Gomes
Phys. Rev. Materials, 4 (2020) 054003. [link]

Facile Heterogeneously Catalyzed Nitrogen Fixation by MXenes
J. D. Gouveia, Á. Morales-García, F. Viñes, José R. B. Gomes, F. Illas
ACS Catal., 10 (2020) 5049. [link]

The Cation Effect on the Solubility of Glycylglycine and N-Acetylglycine in Aqueous Solution: Experimental and Molecular Dynamics Studies
G. Pérez-Sánchez, Y. S. Santos, O. Ferreira, J. A. P. Coutinho, José R. B. Gomes, S. P. Pinho
J. Mol. Liq., 310 (2020) 113044. [link]

Non-ionic hydrophobic eutectics - versatile solvents for tailored metal separation and valorisation
N. Schaeffer, J. H. F. Conceição, M. A. R. Martins, M. C. Neves, G. Pérez-Sánchez, José R. B. Gomes, N. Papaiconomou, J. A. P. Coutinho
Green Chem., 22 (2020) 2810. [link]

Novel insights on biomass delignification with acidic deep eutectic solvents: a mechanistic study of ß-O-4 ether bond cleavage and the role of the halide counterion on the catalytic performance
A. M. da Costa Lopes, José R. B. Gomes, J. A. P. Coutinho, A. Silvestre
Green Chem., 22 (2020) 2474. [link]

Elucidating Structure-Property Relationships in Aluminum Alloy Corrosion Inhibitors by Machine Learning
T. L. P. Galvão, G. Novell-Leuth, A. Kuznetsova, J. Tedim, José R. B. Gomes
J. Phys. Chem. C, 124 (2020) 5624. [link]
Virtual Special Issue: Machine Learning in Physical Chemistry

Cinnamic derivatives as antitubercular agents: characterization by quantitative structure-activity relationship studies
C. Teixeira, C. Ventura, José R. B. Gomes, P. Gomes, F. Martins
Molecules, 25 (2020) 456. [link]

A Computational Study of the Interaction of C2 Hydrocarbons with CuBTC
R. Afonso, J. Toda, José R. B. Gomes, M. Fischer, C. Campbell, M. Jorge
Comput. Mater. Sci., 173 (2020) 109438. [link]

The Effect of Atomic Point Charges on Adsorption Isotherms of CO2 and Water in Metal Organic Frameworks
K. Sladekova, C. Campbell, C. Grant, A. J. Fletcher, José R. B. Gomes, M. Jorge
Adsorption, 26 (2020) 663. [link]

MXenes as promising catalysts for water dissociation
J. D. Gouveia, Á. Morales-García, F. Viñes, F. Illas, José R. B. Gomes
Appl. Catal. B.: Environ., 260 (2020) 118191. [link]

Measurement of astaxanthin and squalene diffusivities in compressed liquid ethyl acetate by Taylor-Aris dispersion method
B. Zêzere, J. M. Silva, I. Portugal, José R. B. Gomes, C. M. Silva
Sep. Purif. Technol., 234 (2020) 116046. [link]

 

 

Principais colaboradores

  • Nacionais:
    • Prof. Doutor João Paulo Prates Ramalho (Universidade de Évora);
    • Doutor Luís Mafra (Universidade de Aveiro);
    • Doutor Moisés Luzia Pinto (Instituto Superior Técnico);
    • Doutora Paula Ferreira (Universidade de Aveiro);
    • Prof. Doutor João Coutinho (Universidade de Aveiro);
    • Doutor João Tedim (Universidade de Aveiro);
    • Doutor Filipe Figueiredo (Universidade de Aveiro).

 

  • Internacionais:
    • Prof. Doutor Francesc Illas (Universidade de Barcelona, Espanha);
    • Doutor Francesc Viñes (Universidade de Barcelona, Espanha);
    • Doutor Miguel Jorge (Universidade de Strathclyde, Reino Unido);
    • Doutor Michael Fischer (Universidade de Bremen, Alemanha).

Grupo de Investigação

Investigadores com Doutoramento:

  • Rui Vieira Afonso (Portugal) – Cálculos DFT da interação de pequenas moléculas com adsorventes sólidos.
  • Tiago Luís Pereira Galvão (Portugal) – Cálculos DFT da interação de inibidores de corrosão com superfícies metálicas. Aproximações de Machine Learning.
  • Gerard Novell-Leruth (Espanha) - Cálculos DFT e de dinâmica molecular clássica da interação de inibidores de corrosão com materiais diversos.
  • José Daniel Gouveia (Portugal) – Estudos de dinâmica molecular clássica de soluções aquosas de sílica. Cálculos DFT de reações catalíticas em superfícies diversas.

 

Investigadores sem Doutoramento:

  • Marcos André Carvalho (Portugal) – co-orientação com Doutor Sérgio Santos, Aveiro. Desenvolvimento de um modelo reativo para simulações de dinâmica molecular da reação de síntese de sílicas porosas.

 

Estudantes de Doutoramento:

  • Manon Wilhelm (França) – co-orientação com Doutor João Tedim, Aveiro. Cálculos DFT com vista ao desenho de novos eletrocatalisadores para a dissociação de água.
  • Mehriban Aliyeva (Azerbaijão) – co-orientação com Prof. Doutor João Coutinho, Aveiro. Simulações de dinâmica molecular clássica de fragmentos proteicos em soluções aquosas.
  • Bruno Zêzere (Portugal) – co-orientação com Prof. Doutor Carlos Silva, Aveiro. Simulações de dinâmica molecular clássica para o cálculo de coeficientes de difusão de compostos bioativos em fluidos supercríticos e em líquidos.
  • Tiago Vieites Branco Fonseca (Portugal) – co-orientação com Prof. Doutor Carlos Silva, Aveiro e com Prof. Mário Quialheiro Simões, Aveiro. Simulações de dinâmica molecular clássica para o cálculo de coeficientes de difusão de compostos bioativos em fluidos supercríticos e em líquidos.
  • Marta Gomes Figueira de Almeida Bordonhos (Portugal) - co-orientação com Prof. Doutor Moisés Luzia Pinto, Lisboa. Cálculos DFT e simulações GCMC da adsorção de gases em materiais porosos.

 

Actividade pedagógica

Universidade do Porto

1996/97
- Foi monitor da disciplina de Introdução à Química I das Licenciaturas de Física, de Física e Tecnologia dos Materiais e de Optoelectrónica e Lasers, da Faculdade de Ciências da Universidade do Porto, tendo a seu cargo a leccionação das aulas práticas (componentes teórico-práticas e laboratorial).

1998/99
- Foi monitor da disciplina de Tecnologias de Informação e Comunicação da Licenciatura em Química, da Faculdade de Ciências da Universidade do Porto, tendo a seu cargo a leccionação das aulas práticas.
- Foi monitor da disciplina de Energia e Organização em Sistemas Biológicos da Licenciatura em Bioquímica, da mesma Faculdade, tendo a seu cargo a leccionação das aulas práticas.

2002-2007
- Leccionou uma aula/4h subordinada ao tema “Aplicação da Química Computacional em Estudos Termoquímicos”, no âmbito da disciplina de Termoquímica, opção da Licenciatura em Química da Faculdade de Ciências da Universidade do Porto, a convite da Profª Doutora Maria das Dores M. C. Ribeiro da Silva.

Co-autor da publicação pedagógica:
Termoquímica: Aulas práticas (disciplina de opção do 3º ano da Licenciatura em Química) Maria das Dores M. C. Ribeiro da Silva, Luís M. N. B. F. Santos, José R. B. Gomes Departamento de Química, Faculdade de Ciências da Universidade do Porto, Fevereiro de 2005.

 

Universidade de Aveiro

2015/16
- Leccionou o módulo de Visualização e Modelação Molecular (56 h) da disciplina de Bioinformática e Estrutura Molecular destinado a alunos do 3º ano das Licenciaturas em Bioquímica e em Biotecnologia.

2016/17
- Teve a seu cargo 4 turmas (componente laboratorial - aulas práticas) da disciplina de Elementos de Química Física, destinada a alunos do 1º ano de diversas Licenciaturas e Mestrados Integrados nas áreas das Ciências e das Engenharias da Universidade de Aveiro.
- Teve a seu cargo 2 turmas (componente laboratorial - aulas práticas) da disciplina de Química Geral, destinada a alunos do 1º ano de diversas Licenciaturas e Mestrados Integrados nas áreas das Ciências e das Engenharias da Universidade de Aveiro.

2017/18
- Teve a seu cargo 2 turmas (componente laboratorial - aulas práticas) da disciplina de Química Geral, destinada a alunos do 1º ano de diversas Licenciaturas e Mestrados Integrados nas áreas das Ciências e das Engenharias da Universidade de Aveiro.

2018/19
- Teve a seu cargo 2 turmas (componente laboratorial - aulas práticas de Química Física) da disciplina de Laboratórios de Química Física / Química Orgânica, destinada a alunos do 3º ano de Licenciaturas e Mestrados Integrados do Departamento de Química da Universidade de Aveiro.
- Teve a seu cargo 1 turma (componente laboratorial - aulas práticas) da disciplina de Química Geral, destinada a alunos do 1º ano de diversas Licenciaturas e Mestrados Integrados nas áreas das Ciências e das Engenharias da Universidade de Aveiro.

2019/20
- Teve a seu cargo 1 turma (componente laboratorial - aulas práticas de Química Física) da disciplina de Laboratórios de Química Física / Química Orgânica, destinada a alunos do 3º ano de Licenciaturas e Mestrados Integrados do Departamento de Química da Universidade de Aveiro.
- Teve a seu cargo 1 turma (componentes teórica e prática) da disciplina de Modelação e Computação Científica, destinada a alunos do 4º ano do Mestrado Integrado em Engenharia Computacional da Universidade de Aveiro.
- Teve a seu cargo 1 turma (componentes teórica e prática) da disciplina de Química Computacional, destinada a alunos do Mestrado em Química da Universidade de Aveiro.

2020/21
- Tem a seu cargo 1 turma (componentes teórica e prática) da disciplina de Modelação e Computação Científica, destinada a alunos do 4º ano do Mestrado Integrado em Engenharia Computacional da Universidade de Aveiro.

 

Projectos

CODECAT: Estudo COmputacional DE novos CATalisadores para a a reacção de water gas shift (PTDC/QUI-QUI/117439/2010)

CoordenadorFundação para a Ciência e a Tecnologia
Adsorção Catálise heterogénea Reacção(ões) em superfície(s) Teoria dos funcionais da densidade

Computational materials sciences for efficient water splitting with nanocrystals from abundant elements (COST Action 18234)

Coordenador LocalEuropean Comission
Modern society in Europe needs a source of energy that is generated without harming the environment. The efficiency of renewable energy converting devices such as water splitting with electrochemical cells based on nano-scaled oxides relies on a sensible choice of material components. However, larger scale material a...

Dadores de gasotransmissores NO e H2S terapêuticos baseados em materiais nanoporosos (PTDC/MED-QUI/28721/2017)

ParticipanteFundação para a Ciência e a Tecnologia

Dados Inteligentes para Desenhar Inibidores de Corrosão (DataCor)

ParticipanteFundação para a Ciência e a Tecnologia

Desenho de organosilicas Mesoporosas para Processo de Separação por Adsorção (PTDC/EQU-EQU/099423/2008)

Coordenador LocalFundação para a Ciência e a Tecnologia
Adsorption equilibrium Molecular Simulation Nanoporous Materials Biogas Upgrading

Desenvolvimento de métodos de ressonância magnética nuclear de alta resolução para 1H e aplicações em materiais e moléculas de interesse biológico (PTDC/QUI-QUI/100998/2008)

ParticipanteFundação para a Ciência e a Tecnologia
Espectroscopia RMN do estado sólido RMN de alta resolução 1H CRAMPS MAS Ultra-rápido

Estudo da captura de CO2 via pós/pré-combustão industriais sorbentes nanoporosos por RMN do estado sólido a pressão variável (PTDC/QEQ-QAN/6373/2014)

ParticipanteFundação para a Ciência e a Tecnologia

Estudo dos mecanismos de auto-reparação associado a nanocontentores inteligentes (SELMA)

CoordenadorFundação para a Ciência e a Tecnologia
Corrosion of metallic substrates is responsible for losses amounting to approximately 3-4% of GNP in developed countries and, therefore, its mitigation will lead to enormous societal benefits. Herewith, we propose a combined computational and experimental study for unveiling the self-healing mechanisms associated with smart nanocontainers (SELMA...

Estudo Teórico da Química de Silicatos na Síntese de Materiais Nanoporosos (PTDC/QUI-QUI/109914/2009)

CoordenadorFundação para a Ciência e a Tecnologia
Sílica Mesoporosa Simulação Molecular Teoria dos Funcionais de Densidade Zeólitos

FISHING - Pescar hits de inibidores de falcipaínas das Malaria Boxes: desenvolvimento e validação da identificação do alvo in silico (EXPL/QEQ-COM/0927/2013)

ParticipanteFundação para a Ciência e a Tecnologia
Malária Screening virtual Farmacóforo, docking e simulações MD Inibição de falcipaínas

Modeling the synthesis of SILica materials VIA multiscale computer simulations (SILVIA)

ParticipanteFundação para a Ciência e a Tecnologia

OXIDAÇÃO CATALÍTICA POR COMPLEXOS DE METAIS DE TRANSIÇÃO IMOBILIZADOS EM SOLIDOS NANOESTRUTURADOS (PTDC/QUI/64770/2006)

ParticipanteFundação para a Ciência e a Tecnologia
Catálise Complexos de metais de transição Reacções de oxidação enantioselectivas sólidos mesoporosos regulares

Phase transitions and ferroelectricity in self-assembled peptides nanotubes (TUBITAK)

ParticipanteFundação para a Ciência e a Tecnologia

Reciclando agentes anti-maláricos: desenho racional de novos análogos de 8-aminoquinolinas com actividade gametocitocida e esquizontocida sanguínea (PTDC/QUI/65142/2006)

Coordenador LocalFundação para a Ciência e a Tecnologia
imidazolidin-4-ones 8-aminoquinolines gametocytocidal blood schizontocidal

SGH : Smart Green Homes (Smart Green Homes)

ParticipanteIndustry National
O Projeto Smart Green Homes (SGH) visa desenvolver soluções integradas de produtos e tecnologias para ambiente doméstico, elevando os padrões de conforto, segurança e satisfação de utilização a um novo nível e, ao mesmo tempo, dar resposta aos problemas de sustentabilidade do planeta, aumentando a eficiência energética e diminuindo as emissões d...

Síntese e Caracterização de novas membranas de Niobiossilicatos e Titanossilicatos Microporosos e a sua aplicação na separação de misturas contendo hidrogénio (PTDC/EQU-EQU/100476/2008)

ParticipanteFundação para a Ciência e a Tecnologia
Separação de Hidrogénio Membranas Titanossilicatos Niobiossilicatos

SusPhotoSolutions - Soluções Fotovoltaicas Sustentáveis (SUSPHOTOSOLUTIONS)

ParticipanteOther National

UnirCell - Sistema combinado de célula de combustível/ electrolisador para fornecimento eficiente de enregia renovável: dos materiais ao dispositivo (SAICTPAC/0032/2015)

ParticipanteFundação para a Ciência e a Tecnologia

Publicações

Measurement of astaxanthin and squalene diffusivities in compressed liquid ethyl acetate by Taylor-Aris dispersion method

Zezere, B; Silva, JM; Portugal, I; Gomes, JRB; Silva, CM
2020, SEPARATION AND PURIFICATION TECHNOLOGY, 234.
ISBN: 1873-3794

Surface-Enhanced Raman Scattering due to a Synergistic Effect on ZnS and Graphene Oxide

Lopes, JL; Fateixa, S; Estrada, AC; Gouveia, JD; Gomes, JRB; Trindade, T
2020, JOURNAL OF PHYSICAL CHEMISTRY C, 124, 23, 12742-12751.
ISBN: 1932-7455

The effect of atomic point charges on adsorption isotherms of CO(2)and water in metal organic frameworks

Sladekova, K; Campbell, C; Grant, C; Fletcher, AJ; Gomes, JRB; Jorge, M
2020, ADSORPTION-JOURNAL OF THE INTERNATIONAL ADSORPTION SOCIETY, 26, 5, 663-685.
ISBN: 1572-8757

A computational study of the interaction of C-2 hydrocarbons with CuBTC

Afonso, R; Toda, J; Gomes, JRB; Fischer, M; Campbell, C; Jorge, M
2020, COMPUTATIONAL MATERIALS SCIENCE, 173.
ISBN: 1879-0801

Cinnamic Derivatives as Antitubercular Agents: Characterization by Quantitative Structure-Activity Relationship Studies

Teixeira, C; Ventura, C; Gomes, JRB; Gomes, P; Martins, F
2020, MOLECULES, 25, 3.
ISBN: 1420-3049

Elucidating Structure-Property Relationships in Aluminum Alloy Corrosion Inhibitors by Machine Learning

Galvao, TLP; Novell-Leruth, G; Kuznetsova, A; Tedim, J; Gomes, JRB
2020, JOURNAL OF PHYSICAL CHEMISTRY C, 124, 10, 5624-5635.
ISBN: 1932-7455

Facile Heterogeneously Catalyzed Nitrogen Fixation by MXenes

Gouveia, JD; Morales-Garcia, A; Vines, F; Gomes, JRB; Illas, F
2020, ACS CATALYSIS, 10, 9, 5049-5056.

MXenes as promising catalysts for water dissociation

Gouveia, JD; Morales-Garcia, A; Vines, F; Illas, F; Gomes, JRB
2020, APPLIED CATALYSIS B-ENVIRONMENTAL, 260.
ISBN: 1873-3883

MXenes atomic layer stacking phase transitions and their chemical activity consequences

Gouveia, JD; Vines, F; Illas, F; Gomes, JRB
2020, PHYSICAL REVIEW MATERIALS, 4, 5.

Non-ionic hydrophobic eutectics - versatile solvents for tailored metal separation and valorisation

Schaeffer, N; Conceicao, JHF; Martins, MAR; Neves, MC; Perez-Sanchez, G; Gomes, JRB; Papaiconomou, N; Coutinho, JAP
2020, GREEN CHEMISTRY, 22, 9, 2810-2820.
ISBN: 1463-9270

Novel insights into biomass delignification with acidic deep eutectic solvents: a mechanistic study of beta-O-4 ether bond cleavage and the role of the halide counterion in the catalytic performance

Lopes, AMD; Gomes, JRB; Coutinho, JAP; Silvestre, AJD
2020, GREEN CHEMISTRY, 22, 8, 2474-2487.
ISBN: 1463-9270

The cation effect on the solubility of glycylglycine and N-acetylglycine in aqueous solution: Experimental and molecular dynamics studies

Perez-Sanchez, G; Santos, YS; Ferreira, O; Coutinho, JAP; Gomes, JRB; Pinho, SP
2020, JOURNAL OF MOLECULAR LIQUIDS, 310.
ISBN: 1873-3166

Mesoscale model of the synthesis of periodic mesoporous benzene-silica

Gouveia, JD; Perez-Sanchez, G; Santos, SM; Carvalho, AP; Gomes, JRB; Jorge, M
2020, JOURNAL OF MOLECULAR LIQUIDS, 316.
ISBN: 1873-3166

Hydrogen bonding networks in gabapentin protic pharmaceutical salts: NMR and in silico studies

Martins, ICB; Sardo, M; Cendak, T; Gomes, JRB; Rocha, J; Duarte, MT; Mafra, L
2019, MAGNETIC RESONANCE IN CHEMISTRY, 57, 5, 243-255.
ISBN: 1097-458X

Pyrolyzed chitosan-based materials for CO2/CH4 separation

Lourenco, MAO; Nunes, C; Gomes, JRB; Pires, J; Pinto, ML; Ferreira, P
2019, CHEMICAL ENGINEERING JOURNAL, 362, 364-374.
ISBN: 1873-3212

Mechanisms of phase separation in temperature-responsive acidic aqueous biphasic systems

Schaeffer, N; Perez-Sanchez, G; Passos, H; Gomes, JRB; Papaiconomou, N; Coutinho, JAP
2019, PHYSICAL CHEMISTRY CHEMICAL PHYSICS, 21, 14, 7462-7473.
ISBN: 1463-9084

Unravelling the Structure of Chemisorbed CO2 Species in Mesoporous Aminosilicas: A Critical Survey

Afonso, R; Sardo, M; Mafra, L; Gomes, JRB
2019, ENVIRONMENTAL SCIENCE & TECHNOLOGY, 53, 5, 2758-2767.
ISBN: 1520-5851

Implicit solvent effects in the determination of Bronsted-Evans-Polanyi relationships for heterogeneously catalyzed reactions

Gomes, JRB; Vines, F; Illas, F; Fajin, JLC
2019, PHYSICAL CHEMISTRY CHEMICAL PHYSICS, 21, 32, 17687-17695.
ISBN: 1463-9084

Enhancement of Ethane Selectivity in Ethane-Ethylene Mixtures by Perfluoro Groups in Zr-Based Metal-Organic Frameworks

Pires, J; Fernandes, J; Dedecker, K; Gomes, JRB; Perez-Sanchez, G; Nouar, F; Serre, C; Pinto, ML
2019, ACS APPLIED MATERIALS & INTERFACES, 11, 30, 27410-27421.
ISBN: 1944-8252

A DFT study on the interaction of small molecules with alkali metal ion-exchanged ETS-10

Pillai, RS; Jorge, M; Gomes, JRB
2019, ZEITSCHRIFT FUR KRISTALLOGRAPHIE-CRYSTALLINE MATERIALS, 234, 7-8, 483-493.
ISBN: 2196-7105

Mechanism of ionic-liquid-based acidic aqueous biphasic system formation

Schaeffer, N; Passos, H; Gras, M; Mogilireddy, V; Leal, JP; Perez-Sanchez, G; Gomes, JRB; Billard, I; Papaiconomou, N; Coutinho, JAP
2018, PHYSICAL CHEMISTRY CHEMICAL PHYSICS, 20, 15, 9838-9846.

Amine functionalized porous silica for CO2/CH4 separation by adsorption: Which amine and why

Mafra, L; Cendak, T; Schneider, S; Wiper, PV; Pires, J; Gomes, JRB; Pinto, ML
2018, CHEMICAL ENGINEERING JOURNAL, 336, 612-621.

Modelling the self-assembly of silica-based mesoporous materials

Jorge, M; Milne, AW; Sobek, ON; Centi, A; Perez-Sanchez, G; Gomes, JRB
2018, MOLECULAR SIMULATION, 44, 6, 435-452.

A molecular dynamics framework to explore the structure and dynamics of layered double hydroxides

Perez-Sanchez, G; Galvao, TLP; Tedim, J; Gomes, JRB
2018, APPLIED CLAY SCIENCE, 163, 164-177.

Improving the functionality and performance of AA2024 corrosion sensing coatings with nanocontainers

Galvao, TLP; Sousa, I; Wilhelm, M; Carneiro, J; Oprsal, J; Kukackova, H; Spacek, V; Maia, F; Gomes, JRB; Tedim, J; Ferreira, MGS
2018, CHEMICAL ENGINEERING JOURNAL, 341, 526-538.

Flue gas adsorption on periodic mesoporous phenylene-silica: a DFT approach

Lourenco, MAO; Ferreira, P; Gomes, JRB
2018, PHYSICAL CHEMISTRY CHEMICAL PHYSICS, 20, 24, 16686-16694.

New Model for Predicting Adsorption of Polar Molecules in Metal-Organic Frameworks with Unsaturated Metal Sites

Campbell, C; Gomes, JRB; Fischer, M; Jorge, M
2018, JOURNAL OF PHYSICAL CHEMISTRY LETTERS, 9, 12, 3544-3553.

Organossílicas mesoporosas periódicas para a purificação de biogás

Lourenço, MAO; Ferreira, P; Gomes, JRB
2018, QUÍMICA - BOL. SOC. PORT. QUIM. 42 (2018) 224-230. , 42, 51, 224.

Corrosion inhibition of copper in aqueous chloride solution by 1H-1,2,3-triazole and 1,2,4-triazole and their combinations: electrochemical, Raman and theoretical studies

Ofoegbu, SU; Galvao, TLP; Gomes, JRB; Tedim, J; Nogueira, HIS; Ferreira, MGS; Zheludkevich, ML
2017, PHYSICAL CHEMISTRY CHEMICAL PHYSICS, 19, 8, 6113-6129.

Understanding Polymorphic Control of Pharmaceuticals Using lmidazolium-Based Ionic Liquid Mixtures as Crystallization Directing Agents

Martins, ICB; Gomes, JRB; Duarte, MT; Mafra, L
2017, CRYSTAL GROWTH & DESIGN, 17, 2, 428-432.

Thermochemical studies on two alkyl-bulky substituted xanthene derivatives: 9,9-dimethylxanthene and 2,7-di-tert-butyl-9,9-dimethylxanthene

Freitas, VLS; Gomes, JRB; da Silva, MDMCR
2017, JOURNAL OF CHEMICAL THERMODYNAMICS, 106, 168-177.

How Density Functional Theory Surface Energies May Explain the Morphology of Particles, Nanosheets, and Conversion Films Based on Layered Double Hydroxides

Galvao, TLP; Neves, CS; Zheludkevich, ML; Gomes, JRB; Tedim, J; Ferreira, MGS
2017, JOURNAL OF PHYSICAL CHEMISTRY C, 121, 4, 2211-2220.

Water dissociation on multimetallic catalysts

Fajin, JLC; Cordeiro, MNDS; Gomes, JRB
2017, APPLIED CATALYSIS B-ENVIRONMENTAL, 218, 199-207.

Molecular Simulations of the Synthesis of Periodic Mesoporous Silica Phases at High Surfactant Concentrations

Chien, SC; Perez-Sanchez, G; Gomes, JRB; Cordeiro, MNDS; Jorge, M; Auerbach, SM; Monson, PA
2017, JOURNAL OF PHYSICAL CHEMISTRY C, 121, 8, 4564-4575.

Prediction of metallic nanotube reactivity for H2O activation

Fajin, JLC; Cordeiro, MNDS; Gomes, JRB
2017, PHYSICAL CHEMISTRY CHEMICAL PHYSICS, 19, 29, 19188-19195.
ISBN: 1463-9084

A Transferable Model for Adsorption in MOFs with Unsaturated Metal Sites

Campbell, C; Ferreiro-Rangel, CA; Fischer, M; Gomes, JRB; Jorge, M
2017, JOURNAL OF PHYSICAL CHEMISTRY C, 121, 1, 441-458.

Adsorption of CO on the rutile TiO2(110) surface: a dispersion-corrected density functional theory study

Ramalho, JPP; Illas, F; Gomes, JRB
2017, PHYSICAL CHEMISTRY CHEMICAL PHYSICS, 19, 3, 2487-2494.
ISBN: 1463-9084

Structure of Chemisorbed CO2 Species in Amine-Functionalized Mesoporous Silicas Studied by Solid-State NMR and Computer Modeling

Mafra, L; Cendak, T; Schneider, S; Wiper, PV; Pires, J; Gomes, JRB; Pinto, ML
2017, JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 139, 1, 389-408.

Carbonization of periodic mesoporous phenylene- and biphenylene-silicas for CO2/CH4 separation

Lourenco, MAO; Pinto, ML; Pires, J; Gomes, JRB; Ferreira, P
2017, CARBON, 119, 267-277.
ISBN: 1873-3891

Microwave-assisted N,N-dialkylation of amine-functionalized periodic mesoporous phenylene-silica: An easy and fast way to design materials

Lourenco, MAO; Ferreira, MJG; Sardo, M; Mafra, L; Gomes, JRB; Ferreira, P
2017, MICROPOROUS AND MESOPOROUS MATERIALS, 249, 10-15.
ISBN: 1873-3093

Simple, mono and bifunctional periodic mesoporous organosilicas for removal of priority hazardous substances from water: The case of mercury(II)

Lourenco, MAO; Figueira, P; Pereira, E; Gomes, JRB; Lopes, CB; Ferreira, P
2017, CHEMICAL ENGINEERING JOURNAL, 322, 263-274.
ISBN: 1873-3212

Selectivity for CO2 over CH4 on a functionalized periodic mesoporous phenylene-silica explained by transition state theory

Kunkel, C; Vines, F; Lourenco, MAO; Ferreira, P; Gomes, JRB; Illas, F
2017, CHEMICAL PHYSICS LETTERS, 671, 161-164.
ISBN: 1873-4448

Energetic and reactivity properties of 9,10-dihydroacridine and diphenylamine: A comparative overview

Freitas, VLS; Gomes, JRB; Liebman, JF; da Silva, MDMCR
2017, JOURNAL OF CHEMICAL THERMODYNAMICS, 115, 276-284.

Periodic mesoporous organosilica with low thiol density - a safer material to trap Hg(II) from water

Figueira, P; Lourenco, MAO; Pereira, E; Gomes, JRB; Ferreira, P; Lopes, CB
2017, JOURNAL OF ENVIRONMENTAL CHEMICAL ENGINEERING, 5, 5, 5043-5053.

Effect of van der Waals interactions in the DFT description of self-assembled monolayers of thiols on gold

Fajin, JLC; Teixeira, F; Gomes, JRB; Cordeiro, MNDS
2016, 9TH CONGRESS ON ELECTRONIC STRUCTURE: PRINCIPLES AND APPLICATIONS (ESPA 2014), 11, 127-139.
ISBN: 978-3-662-49221-5; 978-3-662-48793-8

A computational UV-Vis spectroscopic study of the chemical speciation of 2-mercaptobenzothiazole corrosion inhibitor in aqueous solution

Galvao, TLP; Kuznetsova, A; Gomes, JRB; Zheludkevich, ML; Tedim, J; Ferreira, MGS
2016, THEORETICAL CHEMISTRY ACCOUNTS, 135, 3.

Control of crystallite and particle size in the synthesis of layered double hydroxides: Macromolecular insights and a complementary modeling tool

Galvao, TLP; Neves, CS; Caetano, APF; Maia, F; Mata, D; Malheiro, E; Ferreira, MJ; Bastos, AC; Salak, AN; Gomes, JRB; Tedim, J; Ferreira, MGS
2016, JOURNAL OF COLLOID AND INTERFACE SCIENCE, 468, 86-94.

Effect of the Exchange-Correlation Potential on the Transferability of Bronsted-Evans-Polanyi Relationships in Heterogeneous Catalysis

Fajin, JLC; Vines, F; Cordeiro, MNDS; Illas, F; Gomes, JRB
2016, JOURNAL OF CHEMICAL THEORY AND COMPUTATION, 12, 5, 2121-2126.

Insights into CO2 and CH4 Adsorption by Pristine and Aromatic Amine-Modified Periodic Mesoporous Phenylene-Silicas

Lourenco, MAO; Siquet, C; Santos, J; Jorge, M; Gomes, JRB; Ferreira, P
2016, JOURNAL OF PHYSICAL CHEMISTRY C, 120, 26, 14236-14245.

Interaction of CO2 and CH4 with Functionalized Periodic Mesoporous Phenylene-Silica: Periodic DFT Calculations and Gas Adsorption Measurements

Lourenco, MAO; Siquet, C; Sardo, M; Mafra, L; Pires, J; Jorge, M; Pinto, ML; Ferreira, P; Gomes, JRB
2016, JOURNAL OF PHYSICAL CHEMISTRY C, 120, 7, 3863-3875.

Methanol dissociation on bimetallic surfaces: validity of the general Bronsted-Evans-Polanyi relationship for O-H bond cleavage

Fajin, JLC; Cordeiro, MNDS; Gomes, JRB
2016, RSC ADVANCES, 6, 22, 18695-18702.

Molecular dynamics simulation of diffusion coefficients and structural properties of ketones in supercritical CO2 at infinite dilution

Vaz, RV; Gomes, JRB; Silva, CM
2016, JOURNAL OF SUPERCRITICAL FLUIDS, 107, 630-638.

Multiscale Model for the Templated Synthesis of Mesoporous Silica: The Essential Role of Silica Oligomers

Perez-Sanchez, G; Chien, SC; Gomes, JRB; Cordeiro, MNDS; Auerbach, SM; Monson, PA; Jorge, M
2016, CHEMISTRY OF MATERIALS, 28, 8, 2715-2727.

Striking HIV-1 Entry by Targeting HIV-1 gp41. But, Where Should We Target?

Teixeira, C; Barbault, F; Couesnon, T; Gomes, JRB; Gomes, P; Maurel, F
2016, PLOS ONE, 11, 1.

Why are some cyano-based ionic liquids better glucose solvents than water?

Batista, MLS; Passos, H; Henriques, BJM; Maginn, EJ; Pinho, SP; Freire, MG; Gomes, JRB; Coutinho, JAP
2016, PHYSICAL CHEMISTRY CHEMICAL PHYSICS, 18, 28, 18958-18970.

Optimization of the time and temperature of the microwave-assisted amination of phenylene-PMO

Lourenco, MAO; Gomes, JRB; Ferreira, P
2015, RSC ADVANCES, 5, 12, 9208-9216.

Evaluation of the GROMOS 56A(CARBO) Force Field for the Calculation of Structural, Volumetric, and Dynamic Properties of Aqueous Glucose Systems

Batista, MLS; Perez-Sanchez, G; Gomes, JRB; Coutinho, JAP; Maginn, EJ
2015, JOURNAL OF PHYSICAL CHEMISTRY B, 119, 49, 15310-15319.

A density functional theory study on the interaction of paraffins, olefins, and acetylenes with Na-ETS-10

Pillai, RS; Jorge, M; Gomes, JRB
2015, THEORETICAL CHEMISTRY ACCOUNTS, 134, 4.

Understanding Gas Adsorption Selectivity in IRMOF-8 Using Molecular Simulation

Pillai, RS; Pinto, ML; Pires, J; Jorge, M; Gomes, JRB
2015, ACS APPLIED MATERIALS & INTERFACES, 7, 1, 624-637.

Turning periodic mesoporous organosilicas selective to CO2/CH4 separation: deposition of aluminium oxide by atomic layer deposition

Lourenco, MAO; Silva, RM; Silva, RF; Pinna, N; Pronier, S; Pires, J; Gomes, JRB; Pintof, ML; Ferreira, P
2015, JOURNAL OF MATERIALS CHEMISTRY A, 3, 45, 22860-22867.

Computational and Experimental Study of the Behavior of Cyano-Based Ionic Liquids in Aqueous Solution

Batista, MLS; Kurnia, KA; Pinho, SP; Gomes, JRB; Coutinho, JAP
2015, JOURNAL OF PHYSICAL CHEMISTRY B, 119, 4, 1567-1578.

Understanding the cation specific effects on the aqueous solubility of amino acids: from mono to polyvalent cations

Tome, LIN; Sousa, CSR; Gomes, JRB; Ferreira, O; Coutinho, JAP; Pinho, SP
2015, RSC ADVANCES, 5, 20, 15024-15034.

Fischer-Tropsch Synthesis on Multicomponent Catalysts: What Can We Learn from Computer Simulations?

Fajin, JLC; Cordeiro, MNDS; Gomes, JRB
2015, CATALYSTS, 5, 1, 3-17.

Mechanistic Study of Carbon Monoxide Methanation over Pure and Rhodium- or Ruthenium-Doped Nickel Catalysts

Fajin, JLC; Gomes, JRB; Cordeiro, MNDS
2015, JOURNAL OF PHYSICAL CHEMISTRY C, 119, 29, 16537-16551.

Vapor-Liquid Equilibria of Imidazolium Ionic Liquids with Cyano Containing Anions with Water and Ethanol

Khan, I; Batista, MLS; Carvalho, PJ; Santos, LMNBF; Gomes, JRB; Coutinhot, JAP
2015, JOURNAL OF PHYSICAL CHEMISTRY B, 119, 32, 10287-10303.

Interaction of atmospheric gases with ETS-10: A DFT study

Pillai, RS; Jorge, M; Gomes, JRB
2014, MICROPOROUS AND MESOPOROUS MATERIALS, 190, 38-45.

Prediction of Ionic Liquids Properties through Molecular Dynamics Simulations

Batista, MLS; Coutinho, JAP; Gomes JRB
2014, Current Physical Chemistry, 4, 2, 151-172.

Characterization of systems of thiophene and benzene with ionic liquids

Batista, MLS; Tome, LIN; Neves, CMSS; Gomes, JRB; Coutinho, JAP
2014, JOURNAL OF MOLECULAR LIQUIDS, 192, 26-31.

Density Functional Theory Study of the Water Dissociation on Platinum Surfaces: General Trends

Fajin, JLC; Cordeiro, MNDS; Gomes, JRB
2014, JOURNAL OF PHYSICAL CHEMISTRY A, 118, 31, 5832-5840.

Generalized Bronsted-Evans-Polanyi relationships and descriptors for O-H bond cleavage of organic molecules on transition metal surfaces

Fajin, JLC; Cordeiro, MNDS; Illas, F; Gomes, JRB
2014, JOURNAL OF CATALYSIS, 313, 24-33.

Computational approaches to study adsorption in MOFs with unsaturated metal sites

Fischer, M; Gomes, JRB; Jorge, M
2014, MOLECULAR SIMULATION, 40, 07-Sep, 537-556.

Energetics and Reactivity of Morpholine and Thiomorpholine: A Joint Experimental and Computational Study

Freitas, VLS; Gomes, JRB; da Silva, MDMCR
2014, JOURNAL OF CHEMICAL AND ENGINEERING DATA, 59, 2, 312-322.

Structural, energetic and reactivity properties of phenoxazine and phenothiazine

Freitas, VLS; Gomes, JRB; da Silva, MDMCR
2014, JOURNAL OF CHEMICAL THERMODYNAMICS, 73, 110-120.

Interaction of chitosan and chitin with Ni, Cu and Zn ions: A computational study

Gomes, JRB; Jorge, M; Gomes, P
2014, JOURNAL OF CHEMICAL THERMODYNAMICS, 73, 121-129.

Accurate Model for Predicting Adsorption of Olefins and Paraffins on MOFs with Open Metal Sites

Jorge, M; Fischer, M; Gomes, JRB; Siquet, C; Santos, JC; Rodrigues, AE
2014, INDUSTRIAL & ENGINEERING CHEMISTRY RESEARCH, 53, 40, 15475-15487.

Molecular Simulation of the Adsorption of Methane in Engelhard Titanosilicate Frameworks

Pillai, RS; Gomes, JRB; Jorge, M
2014, LANGMUIR, 30, 25, 7435-7446.

"Recycling" Classical Drugs for Malaria

Teixeira, C; Vale, N; Perez, B; Gomes, A; Gomes, JRB; Gomes, P
2014, CHEMICAL REVIEWS, 114, 22, 11164-11220.

Evidence for the Interactions Occurring Between Ionic Liquids and Tetraethylene Glycol in Binary Mixtures and Aqueous Biphasic Systems

Tome, LIN; Pereira, JFB; Rogers, RD; Freire, MG; Gomes, JRB; Coutinho, JAP
2014, JOURNAL OF PHYSICAL CHEMISTRY B, 118, 17, 4615-4629.

"Washing-out" ionic liquids from polyethylene glycol to form aqueous biphasic systems

Tome, LIN; Pereira, JFB; Rogers, RD; Freire, MG; Gomes, JRB; Coutinho, JAP
2014, PHYSICAL CHEMISTRY CHEMICAL PHYSICS, 16, 6, 2271-2274.

Understanding the reactivity of metallic nanoparticles: beyond the extended surface model for catalysis

Vines, F; Gomes, JRB; Illas, F
2014, CHEMICAL SOCIETY REVIEWS, 43, 14, 4922-4939.

A computational study on the energetics and reactivity of some xanthene and thioxanthene derivatives

Freitas, VLS; Gomes, JRB; da Silva, MDMCR
2013, STRUCTURAL CHEMISTRY, 24, 2, 661-670.

Modeling Self-Assembly of Silica/Surfactant Mesostructures in the Templated Synthesis of Nanoporous Solids

Perez-Sanchez, G; Gomes, JRB; Jorge, M
2013, LANGMUIR, 29, 7, 2387-2396.

Role of the organic linker in the early stages of the templated synthesis of PMOs

Futamura, R; Jorge, M; Gomes, JRB
2013, PHYSICAL CHEMISTRY CHEMICAL PHYSICS, 15, 17, 6166-6169.

A DFT study of the NO dissociation on gold surfaces doped with transition metals

Fajin, JLC; Cordeiro, MNDS; Gomes, JRB
2013, JOURNAL OF CHEMICAL PHYSICS, 138, 7.

N-Cinnamoylated Chloroquine Analogues as Dual-Stage Antimalarial Leads

Perez, BC; Teixeira, C; Albuquerque, IS; Gut, J; Rosenthal, PJ; Gomes, JRB; Prudencio, M; Gomes, P
2013, JOURNAL OF MEDICINAL CHEMISTRY, 56, 2, 556-567.

Development of Plasmodium falciparum Protease Inhibitors in the Past Decade (2002-2012)

Perez, B; Teixeira, C; Gomes, JRB; Gomes, P
2013, CURRENT MEDICINAL CHEMISTRY, 20, 25, 3049-3068.

DFT Study of the Adsorption of D(L-)Cysteine on Flat and Chiral Stepped Gold Surfaces

Fajin, JLC; Gomes, JRB; Cordeiro, MNDS
2013, LANGMUIR, 29, 28, 8856-8864.

Salting-in with a Salting-out Agent: Explaining the Cation Specific Effects on the Aqueous Solubility of Amino Acids

Tome, LIN; Pinho, SP; Jorge, M; Gomes, JRB; Coutinho, JAP
2013, JOURNAL OF PHYSICAL CHEMISTRY B, 117, 20, 6116-6128.

Universal model for accurate calculation of tracer diffusion coefficients in gas, liquid and supercritical systems

Lito, PF; Magalhaes, AL; Gomes, JRB; Silva, CM
2013, JOURNAL OF CHROMATOGRAPHY A, 1290, 1-26.

DFT study on the reaction of O-2 dissociation catalyzed by gold surfaces doped with transition metal atoms

Fajin, JLC; Cordeiro, MNDS; Gomes, JRB
2013, APPLIED CATALYSIS A-GENERAL, 458, 90-102.

Structures and energetics of organosilanes in the gaseous phase: a computational study

Futamura, R; Jorge, M; Gomes, JRB
2013, THEORETICAL CHEMISTRY ACCOUNTS, 132, 2.

Accounting for van der Waals interactions between adsorbates and surfaces in density functional theory based calculations: selected examples

Ramalho, JPP; Gomes, JRB; Illas, F
2013, RSC ADVANCES, 3, 32, 13085-13100.

Toward the discovery of inhibitors of babesipain-1, a Babesia bigemina cysteine protease: in vitro evaluation, homology modeling and molecular docking studies

Perez, B; Antunes, S; Goncalves, LM; Domingos, A; Gomes, JRB; Gomes, P; Teixeira, C
2013, JOURNAL OF COMPUTER-AIDED MOLECULAR DESIGN, 27, 9, 823-835.

Water adsorption on a copper formate paddlewheel model of CuBTC: A comparative MP2 and DFT study

Toda, J; Fischer, M; Jorge, M; Gomes, JRB
2013, CHEMICAL PHYSICS LETTERS, 587, 7-13.

Dibenzofuran and methyldibenzofuran derivatives: assessment of thermochemical data

Freitas, VLS; Gomes, JRB; da Silva, MDMCR
2013, STRUCTURAL CHEMISTRY, 24, 6, 1923-1933.

ENERGETIC AND STRUCTURAL EFFECTS ON OXYGEN OR SULFUR HETEROPOLYCYCLIC COMPOUNDS

Freitas, VLS; da Silva, MDMCR; Gomes, JRB
2013, QUIMICA NOVA, 36, 6, 840-U184.

Cinnamic Acid/Chloroquinoline Conjugates as Potent Agents against Chloroquine-Resistant Plasmodium falciparum

Perez, B; Teixeira, C; Gut, J; Rosenthal, PJ; Gomes, JRB; Gomes, P
2012, CHEMMEDCHEM, 7, 9, 1537-1540.

Synthesis and thermochemical study of quinoxaline-N-oxides: enthalpies of dissociation of the N-O bond

Viveiros, MLF; Freitas, VLS; Vale, N; Gomes, JRB; Gomes, P; da Silva, MDMCR
2012, JOURNAL OF PHYSICAL ORGANIC CHEMISTRY, 25, 5, 420-426.

Novel cinnamic acid/4-aminoquinoline conjugates bearing non-proteinogenic amino acids: Towards the development of potential dual action antimalarials

Perez, BC; Teixeira, C; Figueiras, M; Gut, J; Rosenthal, PJ; Gomes, JRB; Gomes, P
2012, EUROPEAN JOURNAL OF MEDICINAL CHEMISTRY, 54, 887-899.

Unraveling the mechanism of the NO reduction by CO on gold based catalysts

Fajin, JLC; Cordeiro, MNDS; Gomes, JRB
2012, JOURNAL OF CATALYSIS, 289, 11-20.

Experimental and computational thermochemical studies of 9-R-xanthene derivatives (R=OH, COOH, CONH2)

Freitas, VLS; Gomes, JRB; da Silva, MDMCR
2012, JOURNAL OF CHEMICAL THERMODYNAMICS, 54, 108-117.

Ionic and radical adsorption on the Au(hkl) surfaces: A DFT study

Pessoa, AM; Fajin, JLC; Gomes, JRB; Cordeiro, MNDS
2012, SURFACE SCIENCE, 606, 1-2, 69-77.

On the Need for Spin Polarization in Heterogeneously Catalyzed Reactions on Nonmagnetic Metallic Surfaces

Fajin, JLC; Cordeiro, MNDS; Gomes, JRB; Illas, F
2012, JOURNAL OF CHEMICAL THEORY AND COMPUTATION, 8, 5, 1737-1743.

Molecular Dynamics Simulation Studies of the Interactions between Ionic Liquids and Amino Acids in Aqueous Solution

Tome, LIN; Jorge, M; Gomes, JRB; Coutinho, JAP
2012, JOURNAL OF PHYSICAL CHEMISTRY B, 116, 6, 1831-1842.

Water Dissociation on Bimetallic Surfaces: General Trends

Fajin, JLC; Cordeiro, MNDS; Gomes, JRB
2012, JOURNAL OF PHYSICAL CHEMISTRY C, 116, 18, 10120-10128.

Combining Multinuclear High-Resolution Solid-State MAS NMR and Computational Methods for Resonance Assignment of Glutathione Tripeptide

Sardo, M; Siegel, R; Santos, SM; Rocha, J; Gomes, JRB; Mafra, L
2012, JOURNAL OF PHYSICAL CHEMISTRY A, 116, 25, 6711-6719.

The Origin of the LCST on the Liquid-Liquid Equilibrium of Thiophene with Ionic Liquids

Batista, MLS; Tome, LIN; Neves, CMSS; Rocha, EM; Gomes, JRB; Coutinho, JAP
2012, JOURNAL OF PHYSICAL CHEMISTRY B, 116, 20, 5985-5992.

Modeling Adsorption in Metal-Organic Frameworks with Open Metal Sites: Propane/Propylene Separations

Fischer, M; Gomes, JRB; Froba, M; Jorge, M
2012, LANGMUIR, 28, 22, 8537-8549.

Density functional theory model study of size and structure effects on water dissociation by platinum nanoparticles

Fajin, JLC; Bruix, A; Cordeiro, MNDS; Gomes, JRB; Illas, F
2012, JOURNAL OF CHEMICAL PHYSICS, 137, 3.

Molecular docking and 3D-quantitative structure activity relationship analyses of peptidyl vinyl sulfones: Plasmodium Falciparum cysteine proteases inhibitors

Teixeira, C; Gomes, JRB; Couesnon, T; Gomes, P
2011, JOURNAL OF COMPUTER-AIDED MOLECULAR DESIGN, 25, 8, 763-775.

DFT study on the NO oxidation on a flat gold surface model

Fajin, JLC; Cordeiro, MNDS; Gomes, JRB
2011, CHEMICAL PHYSICS LETTERS, 503, 1-3, 129-133.

Viral surface glycoproteins, gp120 and gp41, as potential drug targets against HIV-1: Brief overview one quarter of a century past the approval of zidovudine, the first anti-retroviral drug

Teixeira, C; Gomes, JRB; Gomes, P; Maurel, F
2011, EUROPEAN JOURNAL OF MEDICINAL CHEMISTRY, 46, 4, 979-992.

Viral surface glycoproteins, Gp120 and Gp41, as potential drug targets against HIV-1: Brief overview one quarter of a century past the approval of zidovudine, the first anti-retroviral drug (vol 46, pg 979, 2011)

Teixeira, C; Gomes, JRB; Gomes, P; Maurel, F; Barbault, F
2011, EUROPEAN JOURNAL OF MEDICINAL CHEMISTRY, 46, 8, 3541-3541.

Slow Release of NO by Microporous Titanosilicate ETS-4

Pinto, ML; Rocha, J; Gomes, JRB; Pires, J
2011, JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 133, 16, 6396-6402.

On the theoretical understanding of the unexpected O-2 activation by nanoporous gold

Fajin, JLC; Cordeiro, MNDS; Gomes, JRB
2011, CHEMICAL COMMUNICATIONS, 47, 29, 8403-8405.

Predicting hydration Gibbs energies of alkyl-aromatics using molecular simulation: a comparison of current force fields and the development of a new parameter set for accurate solvation data

Garrido, NM; Jorge, M; Queimada, AJ; Gomes, JRB; Economou, IG; Macedo, EA
2011, PHYSICAL CHEMISTRY CHEMICAL PHYSICS, 13, 38, 17384-17394.

Falcipains, Plasmodium falciparum Cysteine Proteases as Key Drug Targets Against Malaria

Teixeira, C; Gomes, JRB; Gomes, P
2011, CURRENT MEDICINAL CHEMISTRY, 18, 10, 1555-1572.

Catalytic Reactions on Model Gold Surfaces: Effect of Surface Steps and of Surface Doping

Fajin, JLC; Cordeiro, MNDS; Gomes, JRB
2011, CATALYSTS, 1, 1, 40-51.

DFT study on the reaction of NO oxidation on a stepped gold surface

Fajin, JLC; Cordeiro, MNDS; Gomes, JRB
2010, APPLIED CATALYSIS A-GENERAL, 379, 1-2, 111-120.

Descriptors controlling the catalytic activity of metallic surfaces toward water splitting

Fajin, JLC; Cordeiro, MNDS; Illas, F; Gomes, JRB
2010, JOURNAL OF CATALYSIS, 276, 1, 92-100.

Molecular energetics of 4-methyldibenzothiophene: An experimental study

Freitas, VLS; Gomes, JRB; da Silva, MDMCR
2010, JOURNAL OF CHEMICAL THERMODYNAMICS, 42, 2, 251-255.

Energetic effects of ether and ketone functional groups in 9,10-dihydroanthracene compound

Freitas, VLS; Gomes, JRB; da Silva, MDMCR
2010, JOURNAL OF CHEMICAL THERMODYNAMICS, 42, 10, 1248-1254.

Adsorption of Xe atoms on the TiO2(110) surface: A density functional study

Gomes, JRB; Ramalho, JPP; Illas, F
2010, SURFACE SCIENCE, 604, 3-4, 428-434.

Water adsorption and dissociation on the Au(321) stepped surface

Fajin, JLC; Cordeiro, MNDS; Gomes, JRB
2010, JOURNAL OF MOLECULAR STRUCTURE-THEOCHEM, 946, 1-3, 51-56.

A computational study on the thermochemistry of methylbenzo- and methyldibenzothiophenes

Freitas, VLS; da Silva, MDMCR; Gomes, JRB
2010, JOURNAL OF MOLECULAR STRUCTURE-THEOCHEM, 946, 1-3, 20-25.

Cluster and periodic DFT calculations of adsorption of hydroxyl on the Au(h k l) surfaces

Pessoa, AM; Fajin, JLC; Gomes, JRB; Cordeiro, MNDS
2010, JOURNAL OF MOLECULAR STRUCTURE-THEOCHEM, 946, 1-3, 43-50.

SPECIAL ISSUE Achievements and Challenges of Computational Chemistry in Portugal: Selection of Papers Presented at the Portuguese Society Conference of Physical Chemistry Foreword

Gomes, JRB; Illas, F
2010, JOURNAL OF MOLECULAR STRUCTURE-THEOCHEM, 946, 1-3, 1-1.

Experimental and Computational Studies on the Structural and Thermodynamic Properties of Two Sulfur Heterocyclic Keto Compounds

Freitas, VLS; Gomes, JRB; Gales, L; Damas, AM; da Silva, MDMCR
2010, JOURNAL OF CHEMICAL AND ENGINEERING DATA, 55, 11, 5009-5017.

Toward an Understanding of the Aqueous Solubility of Amino Acids in the Presence of Salts: A Molecular Dynamics Simulation Study

Tome, LIN; Jorge, M; Gomes, JRB; Coutinho, JAP
2010, JOURNAL OF PHYSICAL CHEMISTRY B, 114, 49, 16450-16459.

Density functional study of CO and NO adsorption on Ni-doped MgO(100)

Valero, R; Gomes, JRB; Truhlar, DG; Illas, F
2010, JOURNAL OF CHEMICAL PHYSICS, 132, 10.

The enthalpies of dissociation of the N-O bonds in two quinoxaline derivatives

Gomes, JRB; Monteiro, AR; Campos, BB; Gomes, P; da Silva, MDMCR
2009, JOURNAL OF PHYSICAL ORGANIC CHEMISTRY, 22, 1, 17-23.

Energetic studies of two oxygen heterocyclic compounds Xanthone and tetrahydro-gamma-pyrone

Freitas, VLS; Gomes, JRB; da Silva, MDMCR
2009, JOURNAL OF THERMAL ANALYSIS AND CALORIMETRY, 97, 3, 827-833.

Influence of step sites in the molecular mechanism of the water gas shift reaction catalyzed by copper

Fajin, JLC; Cordeiro, MNDS; Illas, F; Gomes, JRB
2009, JOURNAL OF CATALYSIS, 268, 1, 131-141.

Combined experimental and computational study of the energetics of methylindoles

da Silva, MAVR; Cabral, JITA; Gomes, JRB
2009, JOURNAL OF CHEMICAL THERMODYNAMICS, 41, 11, 1193-1198.

Revisiting dibenzothiophene thermochemical data: Experimental and computational studies

Freitas, VLS; Gomes, JRB; da Silva, MDMCR
2009, JOURNAL OF CHEMICAL THERMODYNAMICS, 41, 11, 1199-1205.

H-1-H-1 double-quantum CRAMPS NMR at very-fast MAS (nu(R)=35 kHz): A resolution enhancement method to probe H-1-H-1 proximities in solids

Mafra, L; Gomes, JRB; Trebosc, J; Rocha, J; Amoureux, JP
2009, JOURNAL OF MAGNETIC RESONANCE, 196, 1, 88-91.

Molecular Dynamics Simulation of the Early Stages of the Synthesis of Periodic Mesoporous Silica

Jorge, M; Gomes, JRB; Cordeiro, MNDS; Seaton, NA
2009, JOURNAL OF PHYSICAL CHEMISTRY B, 113, 3, 708-718.

Theoretical Study on the Stability of Formylphenol and Formylaniline Compounds and Corresponding Radicals: O-H or N-H vs C-H Bond Dissociation

Gomes, JRB
2009, JOURNAL OF PHYSICAL CHEMISTRY A, 113, 8, 1628-1634.

2-and 3-Acetylpyrroles: A Combined Calorimetric and Computational Study

Santos, AFLOM; Gomes, JRB; da Silva, MAVR
2009, JOURNAL OF PHYSICAL CHEMISTRY A, 113, 15, 3630-3638.

The Role of Preadsorbed Atomic Hydrogen in the NO Dissociation on a Zigzag Stepped Gold Surface: A DFT Study

Fajin, JLC; Cordeiro, MNDS; Gomes, JRB
2009, JOURNAL OF PHYSICAL CHEMISTRY C, 113, 20, 8864-8877.

Good performance of the M06 family of hybrid meta generalized gradient approximation density functionals on a difficult case: CO adsorption on MgO(001) (vol 129, art no 124710, 2008)

Valero, R; Gomes, JRB; Truhlar, DG; Illas, F
2009, JOURNAL OF CHEMICAL PHYSICS, 130, 5.

Effect of the exchange-correlation potential and of surface relaxation on the description of the H2O dissociation on Cu(111)

Fajin, JLC; Illas, F; Gomes, JRB
2009, JOURNAL OF CHEMICAL PHYSICS, 130, 22.

Energetic Studies and Phase Diagram of Thioxanthene

Freitas, VLS; Monte, MJS; Santos, LMNBF; Gomes, JRB; da Silva, MDMCR
2009, JOURNAL OF PHYSICAL CHEMISTRY A, 113, 46, 12988-12994.

Thermochemistry of Bithiophenes and Thienyl Radicals. A Calorimetric and Computational Study

da Silva, MAVR; Santos, AFLOM; Gomes, JRB; Roux, MV; Temprado, M; Jimenez, P; Notario, R
2009, JOURNAL OF PHYSICAL CHEMISTRY A, 113, 41, 11042-11050.

Gas-phase molecular structure and energetics of anionic silicates

Gomes, JRB; Cordeiro, MNDS; Jorge, M
2008, GEOCHIMICA ET COSMOCHIMICA ACTA, 72, 17, 4421-4439.

DFT Study of the CO Oxidation on the Au(321) Surface

Fajin, JLC; Cordeiro, MNDS; Gomes, JRB
2008, JOURNAL OF PHYSICAL CHEMISTRY C, 112, 44, 17291-17302.

Experimental and Computational Study on the Molecular Energetics of Indoline and Indole

da Silva, MAVR; Cabral, JITA; Gomes, JRB
2008, JOURNAL OF PHYSICAL CHEMISTRY A, 112, 47, 12263-12269.

Good performance of the M06 family of hybrid meta generalized gradient approximation density functionals on a difficult case: CO adsorption on MgO(001)

Valero, R; Gomes, JRB; Truhlar, DG; Illas, F
2008, JOURNAL OF CHEMICAL PHYSICS, 129, 12.

Emerging trends in smart nanocontainers for corrosion applications

In Phuong Nguyen Tri, Trong-On Do, Tuan Anh Nguyen (Eds.), Smart Nanocontainers
T. L. P. Galvão , M. Wilhelm, José R. B. Gomes, J. Tedim
2019, 385-398, Elsevier.
ISBN: 978-0-128-16770-0

Water Gas Shift Reaction Promoted by Bimetallic Catalysts: An Experimental and Theoretical Overview

In Klaus Wandelt (Eds.), Encyclopedia of Interfacial Chemistry - Surface Science and Electrochemistry
J. L. C. Fajín, José R. B. Gomes
2018, 314-318, Elsevier.
ISBN: 978-0-12-809894-3

Gas‐Organic and Gas‐Inorganic Interfacial Effects in Gas/Adsorbent Interactions: The Case of CO2 /CH4 Separation

In M. Delville and A. Taubert (Eds.), Hybrid Organic‐Inorganic Interfaces: Towards Advanced Functional Materials
Lourenço, M. A., Gomes, J. R. and Ferreira, P.
2017, 413-458, Wiley‐VCH Verlag.
ISBN: 978-3-527-34255-6

Fischer-Tropsch Synthesis on Multicomponent Catalysts: What Can We Learn from Computer Simulations?

In Keith Hohn (Eds.), Catalysts: What Can We Learn from Computer Simulations?
José L. C. Fajín, M. Natália D. S. Cordeiro and José R. B. Gomes
2016, 3-17, MDPI AG.
ISBN: 978-3-03842-221-1

Making Periodic Mesoporous Organosilicas Functional Materials

In Mahmood Aliofkhazraei (Eds.), Comprehensive Guide for Mesoporous Materials, Volume 4: Application and Commercialization
Paula Ferreira, Cláudia Bispo, Mirtha A. O. Lourenço, José R. B. Gomes, Nicolas Bion, Karine De Oliveira Vigier and François Jérôme
2015, 4, New York, Nova Publishers.
ISBN: 978-1-63482-092-9

Computational studies of reactions on solid catalysts: The O2 dissociation

Recent Research Developments in Surface Science, Vol.2
J. L. C. Fajín, José R. B. Gomes
2014, Kerala, Research Signpost.
ISBN: 978-81-7895-598-8

Density functional treatment of interactions and chemical reactions at surfaces

Density Functional Theory: Principles, Applications and Analysis,
J. R. B. Gomes, J. L. C. Fajín, M. N. D. S. Cordeiro, C. Teixeira, P. Gomes, Renjith S. Pillai, G. Novell-Leruth, J. Toda, M. Jorge,
2013, New York, Nova Science Publishers, Inc.,,.
ISBN: 978-1-62417-955-6

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